Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015897856.1_cds_XP_016448293.1_42962
CDS Infomation

[gene=LOC107773382] [db_xref=GeneID:107773382] [protein=CRS2-associated factor 2, chloroplastic-like] [protein_id=XP_016448293.1] [location=join(28265..28919,30195..30322,30446..30671,31391..31518,32085..32238,32677..33086)] [gbkey=CDS]
Sequence

ATGCCAATTCTAGCCATGTCACTACCAAAACCCAACCTTTTCTCTAATCTTCCCACTGCT
CCACCCCCCACCCACAACCCCAACTCAACCCCACTACCTCACCCACCCATCCCTATACCC
AAATATCCACCACCCCAAAAGAAACCCCACAATTCTCAAAAACCGCCCAAAAAAACCGCT
CCAGCTTTTAAGACTCACCACCACAATTCCAACTACCACAAACCCGTTAAACCGGGTCAA
GTCATCACATCCGACGGCGACCGTTCCGTGGTCGTTAAAGATAACGGCGTGTCCTACCGT
CTCCCAGGTGCCCCATTTGATTTCCAGTTCAGTTACTCTGAGACTCCAAAAGCTAAACCT
GTTGCTATTCGTGAACCGGGTTTTTTGCCTTTTGCTCCTCCTACTATGCCTAGACCGTGG
ACCGGGAAAGCACCCATGAAGAAATCAAAGAGAAATATTAAGCTTTTTGAGCCGTTGAAT
CCTCTAGTAGAAAATAATGATGGGATTAAGCGTTATGAAATGTTTAGGGCTTATGAGCTG
ATGGGAAAGTTTGAAGGGAGGCCAAAGGAAAAGGTGTTGGGTCCCCCATTAACTAAGGAG
GAAATCCGTGAGCTATTGAAACCTTGTATAGCTAGTAATCGTCAGGTTAATATTGGTCGG
GATGGATTGGTACATAACATGTTAGAGTTAATACATACCCATTGGAGAAGGGATCCGGTT
TGTAAAGTTCGATGTTTAGGTGTCCCCACTGTTGATATGAACAACCTATGCAAATGTCTC
GAGGAGAAGACTGGTGGAAAGATCATACATAGAATGGGTGGTGTAGTTTATCTCTTTCGG
GGCAGGAACTATGACCATCGTACTCGTCCAAAGTACCCACTGATGTTATGGAAACCAGCT
ACACCAGTTTACCCAAAGCTTATACAGGACGCTCCAGAAGGATTGACCAAAGAAGAAGCT
GATGAACTGCGAATCAAGGGAAAAAAGCTACCCCCTATCTGTAAATTGGCTAAAAATGGA
GTCTACCTTACATTAGTTAGAGACGTGAGAAGTGCATTTGAAGCTTCTCCACTTGTGAAG
ATTGATTGCCGGGGGATGCATGCAAGTGATTATAAGAAGATAGGAGCTAAGTTAAAGGAA
TTAGTCCCGTGTGTGCTATTATCATTTGATGATGAACAGATATTGATGTGGAGAGGGAAA
GAGTGGAAACCTATGTACGGTTATGCCCCTGCTGTTGTGTCCTCCAGAATAGATGGTGTC
ACAAATGAAATGAATTCTTCAGAACGTCCAGGCACGGCCAAAGATCGTTCTAAAGCAGTT
GCGAAAACAGTGAGTTCAAGCCCTAAAATGATGTCCCTGTGGAAGAATGCAGTCAGTTCA
GGCAAGGCACTATTACTAGAAGAGATTGATCTGAAACCTGATGATCTATTGAACAAGGTG
GAGGAATTCGATAACATTTCCCAGGCCACAGAGCACACATATCCTGCTTTGGTTTTGTCC
AGTAAACATATACCTGAACAGTCAGGAGTGATGTGGAAAGGTAGTTCTGATGACGACAAT
GACAGCGACGATGAGATAAGTGATGATGATTATGAGGATAAATATAACATTAACAACTCA
GTTGAAGCATTAGAGTCAAGAGTTCCTAAAGGATTTTTACCAGTTGATTTAATAGTAAAG
GAGTTTAGTGATGAGGAGTAA

Peptide Sequence

PEP ID

XP_016448293.1
PEP Infomation

PREDICTED: CRS2-associated factor 2, chloroplastic-like [Nicotiana tabacum]
Sequence

MPILAMSLPKPNLFSNLPTAPPPTHNPNSTPLPHPPIPIPKYPPPQKKPHNSQKPPKKTA
PAFKTHHHNSNYHKPVKPGQVITSDGDRSVVVKDNGVSYRLPGAPFDFQFSYSETPKAKP
VAIREPGFLPFAPPTMPRPWTGKAPMKKSKRNIKLFEPLNPLVENNDGIKRYEMFRAYEL
MGKFEGRPKEKVLGPPLTKEEIRELLKPCIASNRQVNIGRDGLVHNMLELIHTHWRRDPV
CKVRCLGVPTVDMNNLCKCLEEKTGGKIIHRMGGVVYLFRGRNYDHRTRPKYPLMLWKPA
TPVYPKLIQDAPEGLTKEEADELRIKGKKLPPICKLAKNGVYLTLVRDVRSAFEASPLVK
IDCRGMHASDYKKIGAKLKELVPCVLLSFDDEQILMWRGKEWKPMYGYAPAVVSSRIDGV
TNEMNSSERPGTAKDRSKAVAKTVSSSPKMMSLWKNAVSSGKALLLEEIDLKPDDLLNKV
EEFDNISQATEHTYPALVLSSKHIPEQSGVMWKGSSDDDNDSDDEISDDDYEDKYNINNS
VEALESRVPKGFLPVDLIVKEFSDEE

Transcript Sequence

Gene sequence data has not been registered.